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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015883151.1_cds_XP_016438384.1_34050
CDS Infomation

[gene=LOC107764344] [db_xref=GeneID:107764344] [protein=probable trehalose-phosphate phosphatase J] [protein_id=XP_016438384.1] [location=join(64263..64502,64892..65032,66100..66171,66329..66421,66676..66732,66835..66936,67524..67671,67790..67860,68298..68390,68558..68665)] [gbkey=CDS]
Sequence

ATGACTAAACAGAATGTGGTGGTTTCCGATCCTAATTCCGGTATCAACACCGCCACGTTC
ACGGCGGCAGCGGTGCAGAAACCGCCACCGGCGCCGGGAAGTTGCATCAACATTTCAAGA
AAGACACTTGTTGAAATAAATAGTGGTCCAAGAATCAATTCTTGGGTTGATTCAATGAGA
GCTTCATCTCCAACTCATCACAAGTGTACTTCTCTTTCTGAAGACAATACTTCTTGGATG
GTGCACCATCCATCAGCACTAGACATGTTTGAGCAGATAATCAGTGCTTCTAAAGGAAAG
AAAATGGTGATGTTTTTAGACTATGATGGCACCCTTTCCCCCATTGTTGATGACCCTGAT
CAAGCTTTCATGTCTGATGCTATGAGAGGAACAGTGAGAAAGCTTGCTAGATATTTCCCA
ACTGCTATTGTTAGTGGGAGGTGCAGAGATAAGGTATATAGTTTTGTACAATTGGCAGAG
TTGTACTATGCTGGAAGCCATGGCATGGATATAGAAGGGCCTTCAAAAGATTCCAAATAC
AAGAAAGGAGCTCAAGCTGCTCTTTTCCAACCAGCAAGTGAATTTCTTCCAATGATTGTT
GAGGTTTACAAAGAACTGTTGGATAAAACAAATTCTATTAATGGTGTTAGAGTGGAGAAT
AACAAGTTTTGTGTCTCTGTACATTTCCGCTGTGTTGATGAAAAGAAATGGGGTGAACTA
GCACAACAAGTAAAGTCAGTGCTAAAAGAATATCCAAAGCTTCGATTAAGCCAAGGGAGA
AAAGTATTAGAGATTCGGCCAACTATTAAATGGGACAAAGGAAAAGCTCTTGAATTTTTG
CTTGAATCCCTTGGTTACGCTAATTGTACTGATGTCTTTCCTGTATATATTGGAGATGAT
CGAACTGATGAAGATGCTTTCAAGGTATTAAGAGAAAGAGGGCAAGGTTTTGGCATTCTT
GTCTCCAAAACTCCAAAAGATACATATGCATCGTATTCTTTACTAGAACCATCCGAGGTT
ATGATTTTTCTACGACGGTTAGTAGAGTGGAAAAGGTTGTCTTTAAGGAGACAGTCTAAG
ATTCAAAAGCAACTTGAGGAGATAAAAGCATCTCTAAAGAACTGA

Peptide Sequence

PEP ID

XP_016438384.1
PEP Infomation

PREDICTED: probable trehalose-phosphate phosphatase J [Nicotiana tabacum]
Sequence

MTKQNVVVSDPNSGINTATFTAAAVQKPPPAPGSCINISRKTLVEINSGPRINSWVDSMR
ASSPTHHKCTSLSEDNTSWMVHHPSALDMFEQIISASKGKKMVMFLDYDGTLSPIVDDPD
QAFMSDAMRGTVRKLARYFPTAIVSGRCRDKVYSFVQLAELYYAGSHGMDIEGPSKDSKY
KKGAQAALFQPASEFLPMIVEVYKELLDKTNSINGVRVENNKFCVSVHFRCVDEKKWGEL
AQQVKSVLKEYPKLRLSQGRKVLEIRPTIKWDKGKALEFLLESLGYANCTDVFPVYIGDD
RTDEDAFKVLRERGQGFGILVSKTPKDTYASYSLLEPSEVMIFLRRLVEWKRLSLRRQSK
IQKQLEEIKASLKN

Transcript Sequence

Gene sequence data has not been registered.